PESTO: Parameter EStimation TOolbox

نویسندگان

  • Paul Stapor
  • Daniel Weindl
  • Benjamin Ballnus
  • Sabine Hug
  • Carolin Loos
  • Anna Fiedler
  • Sabrina Krause
  • Sabrina Hross
  • Fabian Fröhlich
  • Jan Hasenauer
چکیده

Summary PESTO is a widely applicable and highly customizable toolbox for parameter estimation in MathWorks MATLAB. It offers scalable algorithms for optimization, uncertainty and identifiability analysis, which work in a very generic manner, treating the objective function as a black box. Hence, PESTO can be used for any parameter estimation problem, for which the user can provide a deterministic objective function in MATLAB. Availability and implementation PESTO is a MATLAB toolbox, freely available under the BSD license. The source code, along with extensive documentation and example code, can be downloaded from https://github.com/ICB-DCM/PESTO/. Contact [email protected]. Supplementary information Supplementary data are available at Bioinformatics online.

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عنوان ژورنال:

دوره 34  شماره 

صفحات  -

تاریخ انتشار 2018